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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
857
ChIP-seq
237
total RNA-seq
185
single cell RNA-seq
93
ATAC-seq
58
WGBS
48
snATAC-seq
24
Hi-C
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
pCHi-C
Assay category
185
Transcription
Date released
48
July, 2018
44
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
3
August, 2018
3
June, 2018
1
November, 2018
1
September, 2018
Available data
211
tsv
134
fastq
106
bam
106
bigWig
52
zippedFastqFolder
13
txt
8
csv
0
hic
Organism
185
Homo sapiens
Biosample type
179
primary cell
6
tissue
Organ
75
pancreas
66
epithelium
3
connective tissue
Project
100
AMP
85
HPAP
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
100
AMP-T2D consortium
85
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
month_released!
August, 2020
BIOSAMPLE
ASSAY
185 results
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single cell RNA-seq
primary cell
Langerhans cell
85
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic acinar cell
9
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tissue
islet of Langerhans
6
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