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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1310
total RNA-seq
209
single cell RNA-seq
30
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
ChIP-seq
3
snDrop-seq
1
FAIRE-seq
Assay category
209
Transcription
Target of assay
3
control
Date released
98
August, 2021
49
April, 2018
48
July, 2018
5
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
December, 2019
Available data
209
tsv
134
fastq
106
bam
106
bigWig
52
zippedFastqFolder
13
txt
8
csv
0
tar
Organism
209
Homo sapiens
Biosample type
109
tissue
100
primary cell
Organ
92
heart
80
pancreas
70
epithelium
6
blood vessel
6
vasculature
5
kidney
4
connective tissue
3
brain
2
artery
Project
209
AMP
Genome assembly (visualization)
106
GRCh38
106
hg19
Lab
209
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
5
audit script error
month_released!
December, 2019
organ_slims!
thymus
BIOSAMPLE
ASSAY
209 results
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single cell RNA-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
islet of Langerhans
6
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primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 13 more…
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