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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
755
ChIP-seq
241
total RNA-seq
195
ATAC-seq
95
single cell RNA-seq
49
DNase-seq
49
pCHi-C
19
Hi-C
19
RRBS
12
snATAC-seq
11
small RNA-seq
10
MeRIP-seq
8
WGBS
4
FAIRE-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
snDrop-seq
1
DNAme array
Assay category
95
Transcription
Target of assay
3
control
Date released
43
July, 2018
39
April, 2018
3
August, 2018
3
July, 2019
2
December, 2019
1
February, 2021
1
February, 2023
1
June, 2018
1
May, 2022
1
September, 2018
Available data
91
tsv
89
bam
89
bigWig
84
fastq
2
csv
Organism
95
Homo sapiens
Biosample type
84
primary cell
9
tissue
2
in vitro differentiated cells
Organ
70
pancreas
60
epithelium
4
connective tissue
3
brain
1
heart
1
liver
1
musculature of body
Project
95
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
95
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
2
audit script error
replication_type!
unreplicated
BIOSAMPLE
ASSAY
95 results
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single cell RNA-seq
primary cell
pancreatic alpha cell
11
pancreatic beta cell
11
pancreatic delta cell
10
pancreatic ductal cell
9
pancreatic acinar cell
8
+ See 12 more…
tissue
islet of Langerhans
6
heart
1
liver
1
skeletal muscle tissue
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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