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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1560
ChIP-seq
732
total RNA-seq
372
ATAC-seq
289
single cell RNA-seq
201
DNase-seq
86
RNA microarray
73
snATAC-seq
pCHi-C
25
Hi-C
19
RRBS
16
WGBS
13
small RNA-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
13
Transcription
Date released
13
July, 2019
Available data
13
bam
13
bigWig
13
tsv
Organism
13
Homo sapiens
Biosample type
12
tissue
1
primary cell
Organ
4
brain
adipose tissue
3
connective tissue
3
liver
2
musculature of body
pancreas
1
heart
1
kidney
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
assay_title!
pCHi-C
organ_slims!
adipose tissue
pancreas
spleen
BIOSAMPLE
ASSAY
13 results
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small RNA-seq
tissue
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
heart
1
+ See 6 more…
primary cell
skeletal muscle satellite cell
1
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