Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1832
ChIP-seq
1459
total RNA-seq
518
ATAC-seq
368
single cell RNA-seq
179
DNase-seq
83
snATAC-seq
74
WGBS
55
pCHi-C
25
Hi-C
16
RRBS
16
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
Transcription
Date released
16
July, 2019
3
February, 2021
Available data
19
tsv
16
bam
16
bigWig
Organism
19
Homo sapiens
Biosample type
18
tissue
1
primary cell
Organ
4
brain
4
kidney
3
adipose tissue
3
connective tissue
3
liver
musculature of body
2
pancreas
1
heart
Project
19
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
19
AMP-T2D consortium
month_released!
October, 2022
organ_slims!
bone element
musculature of body
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
snDrop-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 11 more…
primary cell
mesenchymal stem cell of adipose
1
See all biosamples
Download