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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1629
ChIP-seq
1057
total RNA-seq
478
ATAC-seq
276
single cell RNA-seq
180
DNase-seq
86
RNA microarray
84
snATAC-seq
61
WGBS
52
pCHi-C
30
Hi-C
19
RRBS
14
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
14
Transcription
Date released
14
July, 2019
Available data
14
bam
14
bigWig
14
tsv
Organism
14
Homo sapiens
Biosample type
13
tissue
1
primary cell
Organ
4
brain
adipose tissue
3
connective tissue
3
liver
2
musculature of body
2
pancreas
heart
1
kidney
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
files.file_type!
tagAlign bed3+
month_released!
December, 2018
organ_slims!
adipose tissue
heart
BIOSAMPLE
ASSAY
14 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
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primary cell
skeletal muscle satellite cell
1
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