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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1592
ChIP-seq
1254
total RNA-seq
293
ATAC-seq
181
DNase-seq
181
single cell RNA-seq
87
RNA microarray
40
pCHi-C
28
WGBS
27
snATAC-seq
24
Hi-C
16
small RNA-seq
RRBS
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
27
DNA accessibility
Date released
10
April, 2020
8
January, 2021
6
August, 2021
2
February, 2023
1
August, 2022
May, 2022
Organism
26
Homo sapiens
Biosample type
primary cell
27
tissue
Organ
11
pancreas
10
lung
6
kidney
Project
10
LungMap
10
T1D
7
AMP
Lab
10
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
1
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
RRBS
biosample_type!
primary cell
month_released!
May, 2022
BIOSAMPLE
ASSAY
27 results
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snATAC-seq
tissue
lung
10
islet of Langerhans
7
kidney
6
pancreas
4