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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1871
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
353
single cell RNA-seq
212
DNase-seq
85
RNA microarray
75
WGBS
57
pCHi-C
45
snATAC-seq
30
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
45
DNA accessibility
Date released
21
May, 2022
16
January, 2021
6
August, 2021
2
February, 2023
Available data
21
zippedFastqFolder
Organism
45
Homo sapiens
Biosample type
29
primary cell
16
tissue
Organ
10
pancreas
8
blood
8
bodily fluid
6
kidney
Project
21
HPAP
18
T1D
6
AMP
Lab
21
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
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Xin Sun, UCSD
BIOSAMPLE
ASSAY
45 results
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snATAC-seq
primary cell
Langerhans cell
21
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
6
kidney
6
pancreas
4
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