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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 197total RNA-seq
  • 141single cell RNA-seq
  • 88ChIP-seq
  • 76snATAC-seq
  • 60ATAC-seq
  • 47WGBS
  • 17pCHi-C
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
Assay category
  • 76DNA accessibility
Date released
  • 27February, 2021
  • 21May, 2022
  • 16January, 2021
  • 10April, 2020
  • 2February, 2023
Available data
  • 27fastq
  • 21zippedFastqFolder
Organism
  • 75Homo sapiens
Biosample type
  • 56primary cell
  • 20tissue
Organ
  • 10lung
  • 10pancreas
  • 8blood
  • 8bodily fluid
Project
  • 48HPAP
  • 18T1D
  • 10LungMap
  • AMP
Lab
  • 48Klaus Kaestner, Upenn
  • 18Kyle Gaulton, UCSD
  • 10Xin Sun, UCSD
Audit category:
  • 27audit script error
award.project!
  • AMP
BIOSAMPLE
ASSAY

76 results

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snATAC-seq
primary cell
Langerhans cell48
peripheral blood mononuclear cell8
tissue
lung10
islet of Langerhans6
pancreas4
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