Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1740
ChIP-seq
1348
total RNA-seq
444
ATAC-seq
260
single cell RNA-seq
212
DNase-seq
86
RNA microarray
75
WGBS
60
snATAC-seq
39
pCHi-C
31
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
60
DNA accessibility
Date released
27
February, 2021
22
May, 2022
10
April, 2020
August, 2021
1
August, 2022
Available data
27
fastq
21
zippedFastqFolder
1
bed bed3+
1
txt
Organism
59
Homo sapiens
Biosample type
48
primary cell
12
tissue
Organ
10
lung
1
musculature of body
1
pancreas
Project
48
HPAP
T1D
10
LungMap
2
AMP
Genome assembly (visualization)
1
hg19
Lab
48
Klaus Kaestner, Upenn
10
Xin Sun, UCSD
2
AMP-T2D consortium
Audit category:
29
audit script error
award.project!
T1D
month_released!
August, 2018
August, 2021
BIOSAMPLE
ASSAY
60 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
primary cell
Langerhans cell
48
tissue
lung
10
islet of Langerhans
1
skeletal muscle tissue
1
Download