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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
212
ChIP-seq
205
total RNA-seq
174
ATAC-seq
152
single cell RNA-seq
80
snATAC-seq
47
WGBS
17
pCHi-C
10
MeRIP-seq
8
Hi-C
5
STARR-seq
2
Capture-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
80
DNA accessibility
Date released
27
February, 2021
21
May, 2022
16
January, 2021
10
April, 2020
6
August, 2021
February, 2023
Available data
27
fastq
21
zippedFastqFolder
Organism
79
Homo sapiens
Biosample type
56
primary cell
24
tissue
Organ
10
lung
8
blood
8
bodily fluid
8
pancreas
6
kidney
Project
48
HPAP
16
T1D
10
LungMap
6
AMP
Lab
48
Klaus Kaestner, Upenn
16
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
AMP-T2D consortium
Audit category:
27
audit script error
lab.title!
AMP-T2D consortium
month_released!
February, 2023
November, 2018
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
80 results
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snATAC-seq
primary cell
Langerhans cell
48
peripheral blood mononuclear cell
8
tissue
lung
10
kidney
6
islet of Langerhans
4
pancreas
4
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