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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1286
total RNA-seq
1116
ChIP-seq
336
ATAC-seq
274
single cell RNA-seq
163
DNase-seq
87
RNA microarray
72
snATAC-seq
67
WGBS
15
Hi-C
8
pCHi-C
7
small RNA-seq
5
GRO-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
FAIRE-seq
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Assay category
72
DNA accessibility
Date released
27
February, 2021
21
May, 2022
11
January, 2021
10
April, 2020
2
August, 2021
1
August, 2022
Available data
27
fastq
21
zippedFastqFolder
Organism
71
Homo sapiens
Biosample type
54
primary cell
18
tissue
Organ
10
lung
6
blood
6
bodily fluid
6
pancreas
2
kidney
Project
48
HPAP
11
T1D
10
LungMap
3
AMP
Lab
48
Klaus Kaestner, Upenn
11
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
2
Katalin Susztak, Upenn
1
AMP-T2D consortium
Audit category:
28
audit script error
BIOSAMPLE
ASSAY
72 results
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snATAC-seq
primary cell
Langerhans cell
48
peripheral blood mononuclear cell
6
tissue
lung
10
islet of Langerhans
4
kidney
2
pancreas
2
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