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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1018
total RNA-seq
906
ChIP-seq
181
ATAC-seq
179
single cell RNA-seq
178
DNase-seq
87
RNA microarray
27
WGBS
26
snATAC-seq
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
1018
Transcription
Date released
447
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
50
August, 2021
39
May, 2021
31
July, 2019
26
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
February, 2023
9
March, 2020
1
May, 2023
Available data
924
tsv
901
bam
895
bigWig
97
fastq
55
txt
Organism
1021
Homo sapiens
Biosample type
1021
tissue
171
primary cell
132
in vitro differentiated cells
113
cell line
Organ
455
connective tissue
397
adipose tissue
278
pancreas
170
liver
58
bone element
53
kidney
17
brain
15
eye
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
2
artery
1
spinal cord
Project
1019
AMP
2
T1D
Genome assembly (visualization)
896
GRCh38
896
hg19
Lab
944
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
7
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
tagAlign bed3+
month_released!
February, 2023
BIOSAMPLE
ASSAY
1021 results
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total RNA-seq
snDrop-seq
tissue
adipose tissue
382
islet of Langerhans
287
liver
167
bone tissue
58
kidney
49
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