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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
56
ChIP-seq
11
total RNA-seq
6
single cell RNA-seq
4
RRBS
3
pCHi-C
3
snDrop-seq
2
RNA microarray
1
FAIRE-seq
1
small RNA-seq
Assay category
11
Transcription
Date released
6
October, 2019
5
July, 2019
3
February, 2021
Available data
14
tsv
11
bam
11
bigWig
Organism
14
Homo sapiens
Biosample type
6
primary cell
4
cell line
4
tissue
Organ
474
connective tissue
398
adipose tissue
331
pancreas
160
liver
78
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
56
artery
19
eye
17
brain
14
embryo
14
kidney
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
0
ovary
Project
14
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
49
Katalin Susztak, Upenn
14
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
snDrop-seq
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
+ See 1 more…
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
tissue
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
metanephros
1
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