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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
134
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Assay category
72
Transcription
Date released
52
February, 2021
10
July, 2019
3
February, 2020
3
May, 2021
2
March, 2020
2
October, 2019
Available data
72
tsv
69
bam
69
bigWig
Organism
72
Homo sapiens
Biosample type
52
cell line
15
tissue
4
primary cell
1
in vitro differentiated cells
Organ
474
connective tissue
398
adipose tissue
344
pancreas
189
liver
78
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
72
AMP
Genome assembly (visualization)
69
GRCh38
69
hg19
Lab
72
AMP-T2D consortium
assay_title!
MPRA
lab.title!
Klaus Kaestner, Upenn
organ_slims!
ovary
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
heart
4
heart left ventricle
3
right atrium auricular region
3
cardiac atrium
1
cardiac ventricle
1
+ See 3 more…
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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