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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ATAC-seq
93
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
93
Transcription
Date released
545
February, 2021
190
May, 2020
182
May, 2021
120
July, 2018
93
February, 2023
August, 2017
74
August, 2021
44
July, 2019
30
October, 2019
26
May, 2022
26
September, 2018
25
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
15
March, 2020
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
76
fastq
4
tsv
4
txt
Organism
93
Homo sapiens
Biosample type
76
primary cell
13
tissue
4
in vitro differentiated cells
Organ
42
pancreas
39
epithelium
4
bone element
4
connective tissue
4
eye
4
skeleton
Project
76
HPAP
12
AMP
5
T1D
Lab
76
Klaus Kaestner, Upenn
12
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
STARR-seq
files.file_type!
tagAlign bed3+
month_released!
August, 2017
BIOSAMPLE
ASSAY
93 results
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total RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
ilium
1
+ See 2 more…
in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
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