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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
355
total RNA-seq
218
ChIP-seq
141
ATAC-seq
80
single cell RNA-seq
51
WGBS
10
MeRIP-seq
9
Hi-C
snATAC-seq
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
pCHi-C
Assay category
355
Transcription
Date released
120
July, 2018
89
August, 2017
February, 2023
41
May, 2021
26
February, 2021
26
September, 2018
20
November, 2019
16
September, 2020
6
May, 2022
5
March, 2020
2
July, 2019
2
October, 2018
1
August, 2021
1
February, 2020
Available data
330
bam
326
tsv
324
bigWig
141
fastq
6
txt
Organism
355
Homo sapiens
Biosample type
278
tissue
44
primary cell
33
cell line
Organ
470
connective tissue
398
adipose tissue
355
pancreas
189
liver
92
epithelium
72
heart
61
blood vessel
61
vasculature
60
kidney
58
bone element
56
artery
17
brain
15
eye
14
embryo
7
limb
6
musculature of body
5
nerve
1
pericardium
1
spinal cord
Project
335
AMP
16
HPAP
4
T1D
Genome assembly (visualization)
324
GRCh38
324
hg19
Lab
331
AMP-T2D consortium
16
Klaus Kaestner, Upenn
7
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
33
inconsistent ontology term
assay_title!
snATAC-seq
month_released!
February, 2023
organ_slims!
spleen
BIOSAMPLE
ASSAY
355 results
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Clear Filters
total RNA-seq
tissue
islet of Langerhans
273
body of pancreas
3
pancreas
2
primary cell
pancreatic alpha cell
25
pancreatic beta cell
11
pancreatic acinar cell
4
pancreatic ductal cell
4
cell line
EndoC_BH1
33
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