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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
301
ChIP-seq
167
single cell RNA-seq
119
total RNA-seq
87
RNA microarray
58
ATAC-seq
26
snATAC-seq
24
pCHi-C
15
Hi-C
11
RRBS
10
WGBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNase-seq
Assay category
119
Transcription
Date released
50
August, 2021
26
May, 2022
22
February, 2020
14
October, 2019
February, 2023
4
July, 2018
2
March, 2020
1
May, 2021
Available data
55
txt
23
tsv
6
bam
6
fastq
Organism
119
Homo sapiens
Biosample type
119
tissue
21
primary cell
9
cell line
5
in vitro differentiated cells
Organ
49
kidney
21
liver
15
eye
15
pancreas
12
brain
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
nerve
1
spinal cord
Project
117
AMP
2
T1D
Genome assembly (visualization)
GRCh38
892
hg19
Lab
49
Katalin Susztak, Upenn
42
AMP-T2D consortium
20
Karen Mohlke, UNC
7
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
month_released!
February, 2023
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
119 results
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total RNA-seq
tissue
kidney
49
islet of Langerhans
27
liver
20
Ammon's horn
1
C1 segment of cervical spinal cord
1
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