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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
100
single cell RNA-seq
98
total RNA-seq
36
ATAC-seq
27
DNase-seq
2
small RNA-seq
1
Hi-C
Assay category
98
Transcription
Date released
May, 2021
45
May, 2020
26
September, 2018
13
July, 2019
5
December, 2019
4
November, 2020
2
October, 2018
2
October, 2019
1
February, 2021
Available data
98
bam
98
bigWig
98
tsv
28
fastq
Organism
98
Homo sapiens
Biosample type
858
tissue
100
cell line
98
primary cell
48
in vitro differentiated cells
Organ
40
epithelium
28
pancreas
10
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
53
AMP
45
T1D
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
53
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
month_released!
May, 2021
BIOSAMPLE
ASSAY
98 results
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total RNA-seq
primary cell
pancreatic alpha cell
10
pancreatic beta cell
10
hepatocyte
5
osteoblast
5
pancreatic acinar cell
4
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