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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
total RNA-seq
86
ChIP-seq
56
single cell RNA-seq
28
snATAC-seq
17
pCHi-C
11
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
Assay category
103
Transcription
Date released
51
May, 2021
45
May, 2020
5
February, 2023
2
March, 2020
Available data
96
bam
96
bigWig
96
tsv
Organism
103
Homo sapiens
Biosample type
96
primary cell
7
tissue
cell line
Organ
7
pancreas
Project
AMP
103
T1D
HPAP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
101
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
audit.ERROR.category!
inconsistent control
award.project!
AMP
HPAP
biosample_type!
cell line
BIOSAMPLE
ASSAY
103 results
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total RNA-seq
primary cell
monocyte
53
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
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tissue
islet of Langerhans
7
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