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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 197total RNA-seq
  • 141single cell RNA-seq
  • 88ChIP-seq
  • 76snATAC-seq
  • 60ATAC-seq
  • 47WGBS
  • 17pCHi-C
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
Assay category
  • 197Transcription
Date released
  • 81February, 2023
  • 51May, 2021
  • 45May, 2020
  • 16September, 2020
  • 4March, 2020
Available data
  • 98bam
  • 98bigWig
  • 98tsv
  • 92fastq
Organism
  • 197Homo sapiens
Biosample type
  • 188primary cell
  • 7tissue
  • 2cell line
Organ
  • 62pancreas
  • 55epithelium
Project
  • AMP
  • 105T1D
  • 92HPAP
Genome assembly (visualization)
  • 98GRCh38
  • 98hg19
Lab
  • 101Kyle Gaulton, UCSD
  • 92Klaus Kaestner, Upenn
  • 4AMP-T2D consortium
Audit category:
  • 6inconsistent ontology term
award.project!
  • AMP
BIOSAMPLE
ASSAY

197 results

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Clear Filters
total RNA-seq
primary cell
monocyte53
pancreatic alpha cell42
exocrine cell39
pancreatic beta cell11
B cell2
tissue
islet of Langerhans7
cell line
EndoC_BH12
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