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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
151
ATAC-seq
151
total RNA-seq
102
single cell RNA-seq
28
DNase-seq
17
pCHi-C
9
RRBS
8
snATAC-seq
7
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
151
Transcription
Date released
55
May, 2021
47
May, 2020
26
September, 2018
9
July, 2019
5
December, 2019
4
November, 2020
2
October, 2018
2
October, 2019
1
February, 2021
Available data
148
bigWig
146
bam
146
tsv
28
fastq
2
bed bed3+
Organism
151
Homo sapiens
Biosample type
1016
tissue
151
primary cell
135
in vitro differentiated cells
61
cell line
Organ
40
epithelium
28
pancreas
10
connective tissue
6
kidney
5
liver
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
96
T1D
55
AMP
Genome assembly (visualization)
148
hg19
146
GRCh38
Lab
98
Kyle Gaulton, UCSD
Klaus Kaestner, Upenn
53
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
organ_slims!
heart
BIOSAMPLE
ASSAY
151 results
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total RNA-seq
primary cell
monocyte
54
pancreatic alpha cell
10
pancreatic beta cell
10
hepatocyte
5
osteoblast
5
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