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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
255
ChIP-seq
232
total RNA-seq
198
ATAC-seq
184
single cell RNA-seq
56
snATAC-seq
47
WGBS
27
DNase-seq
17
pCHi-C
5
Hi-C
1
DNAme array
1
RRBS
Assay category
232
Transcription
Date released
76
February, 2023
55
May, 2021
47
May, 2020
26
September, 2018
16
September, 2020
July, 2019
5
December, 2019
4
November, 2020
2
October, 2018
October, 2019
1
February, 2021
Available data
137
bigWig
135
bam
135
tsv
120
fastq
2
bed bed3+
Organism
232
Homo sapiens
Biosample type
978
tissue
232
primary cell
134
in vitro differentiated cells
109
cell line
Organ
86
epithelium
81
pancreas
5
connective tissue
5
liver
Project
96
T1D
92
HPAP
44
AMP
Genome assembly (visualization)
137
hg19
135
GRCh38
Lab
98
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
July, 2019
October, 2019
BIOSAMPLE
ASSAY
232 results
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total RNA-seq
primary cell
monocyte
54
pancreatic alpha cell
52
exocrine cell
39
pancreatic beta cell
21
hepatocyte
5
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