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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
ChIP-seq
150
total RNA-seq
127
ATAC-seq
117
single cell RNA-seq
56
snATAC-seq
17
pCHi-C
4
RRBS
3
Hi-C
2
DNase-seq
2
small RNA-seq
1
DNAme array
Assay category
150
Transcription
Date released
55
May, 2021
47
May, 2020
39
February, 2023
8
July, 2019
November, 2020
1
February, 2021
Available data
108
bigWig
106
bam
106
tsv
39
fastq
2
bed bed3+
Organism
150
Homo sapiens
Biosample type
1029
tissue
150
primary cell
134
in vitro differentiated cells
79
cell line
Organ
epithelium
81
pancreas
6
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
96
T1D
39
HPAP
15
AMP
Genome assembly (visualization)
108
hg19
106
GRCh38
Lab
98
Kyle Gaulton, UCSD
39
Klaus Kaestner, Upenn
13
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
month_released!
June, 2019
November, 2020
organ_slims!
epithelium
BIOSAMPLE
ASSAY
150 results
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total RNA-seq
primary cell
monocyte
54
exocrine cell
39
CD8-positive, alpha-beta T cell
4
B cell
2
T follicular helper cell
2
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