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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
ChIP-seq
117
single cell RNA-seq
103
total RNA-seq
56
snATAC-seq
27
ATAC-seq
17
pCHi-C
12
DNase-seq
4
RRBS
3
Hi-C
2
small RNA-seq
1
DNAme array
Assay category
103
Transcription
Date released
55
May, 2021
May, 2020
39
February, 2023
8
July, 2019
November, 2020
1
February, 2021
Available data
63
bigWig
61
bam
61
tsv
39
fastq
2
bed bed3+
Organism
103
Homo sapiens
Biosample type
886
tissue
134
in vitro differentiated cells
103
primary cell
79
cell line
Organ
epithelium
81
pancreas
6
connective tissue
6
kidney
5
liver
4
heart
2
artery
2
blood vessel
2
vasculature
1
adipose tissue
1
musculature of body
1
pericardium
Project
51
T1D
39
HPAP
13
AMP
Genome assembly (visualization)
63
hg19
61
GRCh38
Lab
53
Kyle Gaulton, UCSD
39
Klaus Kaestner, Upenn
11
AMP-T2D consortium
month_released!
May, 2020
November, 2020
organ_slims!
epithelium
BIOSAMPLE
ASSAY
103 results
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total RNA-seq
primary cell
monocyte
52
exocrine cell
39
CD8-positive, alpha-beta T cell
2
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
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