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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 279ChIP-seq
  • 247total RNA-seq
  • 200ATAC-seq
  • 187single cell RNA-seq
  • 56snATAC-seq
  • 47WGBS
  • 31DNase-seq
  • 17pCHi-C
  • 10Hi-C
  • 10RRBS
  • 2small RNA-seq
  • 1DNAme array
  • 1FAIRE-seq
Assay category
  • 247Transcription
Date released
  • 76February, 2023
  • 55May, 2021
  • 47May, 2020
  • 26September, 2018
  • 16September, 2020
  • 13July, 2019
  • 5December, 2019
  • 4November, 2020
  • 2October, 2018
  • 2October, 2019
  • 1February, 2021
Available data
  • 152bigWig
  • 150bam
  • 150tsv
  • 120fastq
  • 2bed bed3+
Organism
  • 247Homo sapiens
Biosample type
  • 1031tissue
  • 247primary cell
  • 136in vitro differentiated cells
  • 113cell line
Organ
  • 93epithelium
  • 81pancreas
  • 10connective tissue
  • 6kidney
  • 5liver
  • 4heart
  • 2artery
  • 2blood vessel
  • 2vasculature
  • 1adipose tissue
  • 1musculature of body
  • 1pericardium
Project
  • 96T1D
  • 92HPAP
  • 59AMP
Genome assembly (visualization)
  • 152hg19
  • 150GRCh38
Lab
  • 98Kyle Gaulton, UCSD
  • 92Klaus Kaestner, Upenn
  • 57AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

247 results

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Clear Filters
total RNA-seq
primary cell
monocyte54
pancreatic alpha cell52
exocrine cell39
pancreatic beta cell21
hepatocyte5
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