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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
972
total RNA-seq
903
ChIP-seq
260
ATAC-seq
178
DNase-seq
167
single cell RNA-seq
27
WGBS
27
snATAC-seq
24
pCHi-C
16
small RNA-seq
15
Hi-C
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
RNA microarray
3
snDrop-seq
Assay category
972
Transcription
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
39
May, 2021
31
July, 2019
25
February, 2020
22
October, 2019
20
May, 2022
19
November, 2019
9
February, 2023
9
March, 2020
1
August, 2021
1
May, 2023
Available data
925
tsv
901
bam
895
bigWig
97
fastq
txt
Organism
972
Homo sapiens
Biosample type
972
tissue
247
primary cell
136
in vitro differentiated cells
113
cell line
Organ
455
connective tissue
397
adipose tissue
277
pancreas
170
liver
58
bone element
19
eye
17
brain
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
2
artery
2
epithelium
1
kidney
1
spinal cord
Project
965
AMP
7
T1D
Genome assembly (visualization)
896
GRCh38
896
hg19
Lab
945
AMP-T2D consortium
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bedpe
txt
organ_slims!
ovary
BIOSAMPLE
ASSAY
972 results
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Clear Filters
total RNA-seq
tissue
adipose tissue
382
islet of Langerhans
286
liver
167
bone tissue
58
subcutaneous adipose tissue
7
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