Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
292
ChIP-seq
217
ATAC-seq
174
single cell RNA-seq
135
total RNA-seq
87
RNA microarray
28
snATAC-seq
25
pCHi-C
16
Hi-C
11
RRBS
11
WGBS
4
MeRIP-seq
3
snDrop-seq
1
DNase-seq
Assay category
135
Transcription
Date released
50
August, 2021
26
May, 2022
24
February, 2020
14
October, 2019
13
February, 2023
4
July, 2018
2
March, 2020
1
May, 2021
1
May, 2023
Available data
924
tsv
901
bam
bigWig
97
fastq
59
txt
Organism
135
Homo sapiens
Biosample type
135
tissue
95
primary cell
9
cell line
9
in vitro differentiated cells
Organ
49
kidney
21
liver
20
pancreas
19
eye
12
brain
4
bone element
4
skeleton
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
epithelium
2
musculature of body
1
nerve
spinal cord
Project
128
AMP
7
T1D
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
53
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
files.file_type!
bigWig
month_released!
August, 2018
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
135 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
tissue
kidney
49
islet of Langerhans
32
liver
20
retina
3
pigmented layer of retina
2
+ See 29 more…
See all biosamples
Download