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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
287
total RNA-seq
117
ChIP-seq
73
ATAC-seq
11
snATAC-seq
7
DNase-seq
6
single cell RNA-seq
4
Hi-C
4
MeRIP-seq
4
WGBS
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
pCHi-C
Assay category
287
Transcription
Date released
120
July, 2018
89
August, 2017
37
May, 2021
19
November, 2019
9
February, 2023
6
May, 2022
3
March, 2020
2
July, 2019
1
August, 2021
1
February, 2020
Available data
269
bam
265
tsv
263
bigWig
97
fastq
10
txt
Organism
287
Homo sapiens
Biosample type
287
tissue
81
primary cell
33
cell line
Organ
455
connective tissue
397
adipose tissue
283
pancreas
170
liver
62
bone element
50
kidney
19
eye
17
brain
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
280
AMP
7
T1D
Genome assembly (visualization)
263
GRCh38
263
hg19
Lab
274
AMP-T2D consortium
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
287 results
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total RNA-seq
tissue
islet of Langerhans
278
body of pancreas
3
pancreas
2
acetabular part of hip bone
1
ilium
1
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