Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
625
ChIP-seq
587
total RNA-seq
29
ATAC-seq
8
DNase-seq
8
WGBS
6
small RNA-seq
5
pCHi-C
4
Hi-C
2
STARR-seq
1
RNA microarray
1
single cell RNA-seq
1
whole genome sequencing assay
Assay category
587
Transcription
Date released
386
February, 2021
143
May, 2020
20
May, 2022
13
July, 2019
9
August, 2021
5
December, 2019
5
January, 2019
3
February, 2020
1
March, 2020
1
May, 2023
1
October, 2019
Available data
566
tsv
554
bam
554
bigWig
5
fastq
Organism
587
Homo sapiens
Biosample type
567
tissue
14
cell line
6
primary cell
Organ
474
connective tissue
398
adipose tissue
397
pancreas
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
14
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
587
AMP
Genome assembly (visualization)
555
GRCh38
555
hg19
Lab
558
AMP-T2D consortium
20
Karen Mohlke, UNC
9
Bing Ren, UCSD
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
587 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
tissue
adipose tissue
382
liver
167
subcutaneous adipose tissue
7
omental fat pad
5
right lobe of liver
3
+ See 1 more…
cell line
HepG2
14
primary cell
hepatocyte
5
mesenchymal stem cell of adipose
1
See all biosamples
Download