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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1578ChIP-seq
  • 1282total RNA-seq
  • 209DNase-seq
  • 175ATAC-seq
  • 106single cell RNA-seq
  • 18WGBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 1pCHi-C
Assay category
  • 1282Transcription
Date released
  • 545February, 2021
  • 188May, 2020
  • 173May, 2021
  • 116July, 2018
  • 89August, 2017
  • 44July, 2019
  • 26September, 2018
  • 20November, 2019
  • 16October, 2019
  • 15August, 2021
  • 15February, 2018
  • 13March, 2020
  • 6May, 2022
  • 5December, 2019
  • 5January, 2019
  • 4November, 2020
  • 2October, 2018
Available data
  • 1315tsv
  • 1282bam
  • 1278bigWig
  • 237fastq
  • 59txt
  • 2bed bed3+
Organism
  • 1282Homo sapiens
Biosample type
  • 901tissue
  • 150primary cell
  • 127in vitro differentiated cells
  • 104cell line
Organ
  • 467connective tissue
  • 395adipose tissue
  • 330pancreas
  • 159liver
  • 76epithelium
  • 69heart
  • 58blood vessel
  • 58bone element
  • 58vasculature
  • 54artery
  • 14embryo
  • 11kidney
  • 5brain
  • 4limb
  • 4musculature of body
  • 4nerve
  • 1pericardium
Project
  • 1184AMP
  • 98T1D
Genome assembly (visualization)
  • 1276GRCh38
  • 1276hg19
Lab
  • 1180AMP-T2D consortium
  • 102Kyle Gaulton, UCSD
Audit category:
  • 127inconsistent ontology term
BIOSAMPLE
ASSAY

1282 results

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Clear Filters
total RNA-seq
tissue
adipose tissue381
islet of Langerhans266
liver147
bone tissue58
subcutaneous adipose tissue6
primary cell
monocyte53
pancreatic alpha cell10
pancreatic beta cell10
hepatocyte5
osteoblast5
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
neural progenitor cell7
adipocyte4
cell line
smooth muscle cell of the coronary artery52
EndoC_BH133
H1-hESC8
HepG25
early embryonic cell2
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