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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
470
total RNA-seq
207
ChIP-seq
93
single cell RNA-seq
53
ATAC-seq
32
DNase-seq
14
WGBS
5
pCHi-C
4
small RNA-seq
3
Hi-C
2
RRBS
1
RNA microarray
Assay category
470
Transcription
Date released
438
February, 2021
19
July, 2019
5
February, 2020
3
May, 2021
2
March, 2020
2
October, 2019
1
May, 2023
Available data
469
tsv
464
bam
464
bigWig
Organism
470
Homo sapiens
Biosample type
412
tissue
52
cell line
5
primary cell
1
in vitro differentiated cells
Organ
474
connective tissue
398
adipose tissue
397
pancreas
189
liver
131
epithelium
72
heart
62
bone element
61
blood vessel
61
vasculature
60
kidney
56
artery
19
eye
17
brain
10
embryo
7
limb
6
musculature of body
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
470
AMP
Genome assembly (visualization)
465
GRCh38
465
hg19
Lab
470
AMP-T2D consortium
month_released!
February, 2018
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
470 results
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total RNA-seq
tissue
adipose tissue
382
subcutaneous adipose tissue
7
omental fat pad
5
heart
4
heart left ventricle
3
+ See 7 more…
cell line
smooth muscle cell of the coronary artery
52
primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
mesenchymal stem cell of adipose
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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