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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
ATAC-seq
68
total RNA-seq
41
WGBS
34
single cell RNA-seq
24
ChIP-seq
22
snATAC-seq
Assay category
68
Transcription
Date released
545
February, 2021
182
May, 2021
120
July, 2018
93
February, 2023
89
August, 2017
65
August, 2021
47
May, 2020
40
July, 2019
29
October, 2019
26
September, 2018
24
February, 2020
20
November, 2019
16
September, 2020
15
February, 2018
14
March, 2020
6
May, 2022
4
November, 2020
2
October, 2018
1
May, 2023
Available data
66
bam
60
bigWig
60
tsv
21
fastq
6
txt
Organism
68
Homo sapiens
Biosample type
47
primary cell
15
in vitro differentiated cells
6
tissue
Organ
liver
6
pancreas
4
embryo
Project
45
T1D
23
AMP
Genome assembly (visualization)
60
GRCh38
60
hg19
Lab
51
Kyle Gaulton, UCSD
17
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
68 results
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Clear Filters
total RNA-seq
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 22 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
tissue
islet of Langerhans
6
See all biosamples
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