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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 81DNase-seq
  • 75ATAC-seq
  • 64single cell RNA-seq
  • 60total RNA-seq
  • 52ChIP-seq
  • 6snATAC-seq
  • 4RRBS
  • 3snDrop-seq
  • 2RNA microarray
  • 2STARR-seq
  • 2pCHi-C
  • 1FAIRE-seq
  • 1Hi-C
  • 1small RNA-seq
Assay category
  • 60Transcription
Date released
  • 49August, 2021
  • 6October, 2019
  • 5July, 2019
Available data
  • 49txt
  • 11bam
  • 11bigWig
  • 11tsv
Organism
  • 60Homo sapiens
Biosample type
  • 50tissue
  • 6primary cell
  • 4cell line
Organ
  • 474connective tissue
  • 398adipose tissue
  • 397pancreas
  • 189liver
  • 131epithelium
  • 72heart
  • 62bone element
  • 61blood vessel
  • 61vasculature
  • 60kidney
  • 56artery
  • 19eye
  • 17brain
  • 14embryo
  • 7limb
  • 6musculature of body
  • 5nerve
  • 4skeleton
  • 1pericardium
  • 1spinal cord
Project
  • 60AMP
Genome assembly (visualization)
  • 11GRCh38
  • 11hg19
Lab
  • 49Katalin Susztak, Upenn
  • 11AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
BIOSAMPLE
ASSAY

60 results

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total RNA-seq
tissue
kidney49
metanephros1
primary cell
epithelial cell of proximal tubule1
glomerular endothelial cell1
kidney epithelial cell1
kidney glomerular epithelial cell1
kidney tubule cell1
renal cortical epithelial cell1
cell line
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
RCC 7860 vector1
glomerular visceral epithelial cell1
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