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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 397total RNA-seq
  • 218ChIP-seq
  • 152ATAC-seq
  • 80single cell RNA-seq
  • 51WGBS
  • 11snATAC-seq
  • 10MeRIP-seq
  • 9Hi-C
  • 8DNase-seq
  • 2Capture-C
  • 2FAIRE-seq
  • 2RRBS
  • 2small RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1pCHi-C
Assay category
  • 397Transcription
Date released
  • 120July, 2018
  • 89August, 2017
  • 42February, 2023
  • 41May, 2021
  • 26February, 2021
  • 26September, 2018
  • 20November, 2019
  • 16September, 2020
  • 6May, 2022
  • 5March, 2020
  • 2July, 2019
  • 2October, 2018
  • 1August, 2021
  • 1February, 2020
Available data
  • 330bam
  • 326tsv
  • 324bigWig
  • 178fastq
  • 6txt
Organism
  • 397Homo sapiens
Biosample type
  • 283tissue
  • 81primary cell
  • 33cell line
Organ
  • 474connective tissue
  • 398adipose tissue
  • 397pancreas
  • 189liver
  • 131epithelium
  • 72heart
  • 62bone element
  • 61blood vessel
  • 61vasculature
  • 60kidney
  • 56artery
  • 19eye
  • 17brain
  • 14embryo
  • 7limb
  • 6musculature of body
  • 5nerve
  • 4skeleton
  • 1pericardium
  • 1spinal cord
Project
  • 335AMP
  • 53HPAP
  • 9T1D
Genome assembly (visualization)
  • 324GRCh38
  • 324hg19
Lab
  • 331AMP-T2D consortium
  • 53Klaus Kaestner, Upenn
  • 12Kyle Gaulton, UCSD
  • 1Bing Ren, UCSD
Audit category:
  • 33inconsistent ontology term
BIOSAMPLE
ASSAY

397 results

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Clear Filters
total RNA-seq
tissue
islet of Langerhans278
body of pancreas3
pancreas2
primary cell
pancreatic alpha cell52
pancreatic beta cell21
pancreatic acinar cell4
pancreatic ductal cell4
cell line
EndoC_BH133
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