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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 190total RNA-seq
  • 181ChIP-seq
  • 105ATAC-seq
  • 89single cell RNA-seq
  • 28pCHi-C
  • 27DNase-seq
  • 11small RNA-seq
  • 9Hi-C
  • 5snATAC-seq
  • 4MeRIP-seq
  • 3FAIRE-seq
  • 2Capture-C
  • 2snDrop-seq
  • 1DNAme array
Assay category
  • 190Transcription
Date released
  • 64May, 2021
  • 43May, 2020
  • 25February, 2020
  • 23July, 2019
  • 12February, 2023
  • 8August, 2021
  • 6February, 2021
  • 3March, 2020
  • 3October, 2019
  • 2July, 2018
  • 1February, 2018
Available data
  • 168tsv
  • 142bam
  • 142bigWig
  • 4txt
  • 3fastq
Organism
  • 190Homo sapiens
Biosample type
  • 83primary cell
  • 59tissue
  • 48in vitro differentiated cells
Organ
  • 17connective tissue
  • 16brain
  • 12heart
  • 12pancreas
  • 9epithelium
  • 8adipose tissue
  • 7kidney
  • 5blood vessel
  • 5vasculature
  • 4artery
  • 4bone element
  • 4musculature of body
  • 4skeleton
  • 3limb
  • 3liver
  • 2embryo
  • 1eye
  • 1nerve
  • 1pericardium
  • 1spinal cord
Project
  • 119AMP
  • 71T1D
Genome assembly (visualization)
  • 142GRCh38
  • 142hg19
Lab
  • 115AMP-T2D consortium
  • 74Kyle Gaulton, UCSD
  • 1Bing Ren, UCSD
Audit category:
  • 24inconsistent ontology term
BIOSAMPLE
ASSAY

190 results

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Clear Filters
total RNA-seq
primary cell
monocyte26
B cell2
CD8-positive, alpha-beta T cell2
T follicular helper cell2
T-helper 1 cell2
tissue
islet of Langerhans10
subcutaneous adipose tissue3
visceral abdominal adipose tissue3
cerebellum2
frontal cortex2
in vitro differentiated cells
cardiomyocytes12
induced pluripotent stem cell9
neural progenitor cell7
embryonic stem cell5
adipocyte1
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