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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 574ChIP-seq
  • 90ATAC-seq
  • 51total RNA-seq
  • 22DNase-seq
  • 21pCHi-C
  • 19RRBS
  • 10Hi-C
  • 8WGBS
  • 7snATAC-seq
  • 6MeRIP-seq
  • 6single cell RNA-seq
  • 4STARR-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 1FAIRE-seq
Assay category
  • 51Transcription
Date released
  • 18February, 2021
  • 9October, 2019
  • 8August, 2021
  • 5December, 2019
  • 5January, 2019
  • 5March, 2020
  • 1July, 2019
Available data
  • 51bam
  • 51bigWig
  • 51tsv
  • 5fastq
Organism
  • 51Homo sapiens
Biosample type
  • 22in vitro differentiated cells
  • 20cell line
  • 6primary cell
  • 3tissue
Organ
  • 11liver
  • 8embryo
  • 8epithelium
  • 4kidney
  • 2pancreas
  • 1brain
  • 1heart
Project
  • 49AMP
  • 2T1D
Genome assembly (visualization)
  • 51GRCh38
  • 51hg19
Lab
  • 51AMP-T2D consortium
Audit category:
  • 27inconsistent ontology term
BIOSAMPLE
ASSAY

51 results

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Clear Filters
total RNA-seq
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)19
cardiomyocytes (cardiac muscle cell)2
lymphocyte of B lineage (iPSC)1
cell line
H1-hESC8
HepG25
EndoC_BH12
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
primary cell
hepatocyte5
skeletal muscle myoblast1
tissue
brain1
heart1
liver1
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