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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
17
pCHi-C
8
total RNA-seq
5
ATAC-seq
1
DNAme array
Assay category
74
DNA binding
8
Transcription
5
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
32
broad histone mark
22
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
210
August, 2021
141
February, 2021
134
May, 2020
126
August, 2017
126
November, 2017
114
February, 2023
105
May, 2021
97
October, 2019
96
May, 2022
47
September, 2023
40
March, 2020
40
September, 2020
27
July, 2019
24
February, 2020
23
May, 2019
19
April, 2020
18
October, 2018
17
December, 2017
16
April, 2019
9
October, 2017
8
February, 2018
8
January, 2018
8
January, 2021
8
June, 2019
8
November, 2018
5
December, 2018
5
December, 2019
4
January, 2019
4
March, 2023
3
May, 2023
1
August, 2018
1
October, 2022
1
September, 2018
0
September, 2017
Available data
40
bigWig
30
bed narrowPeak
2
bed bed3+
Organism
105
Homo sapiens
Biosample type
57
primary cell
47
in vitro differentiated cells
1
tissue
Organ
pancreas
17
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
88
AMP
17
T1D
Genome assembly (visualization)
273
hg19
GRCh38
Lab
99
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
assembly!!
GRCh38
organ_slims!
pancreas
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
ATAC-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
1
2
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
thymus
1
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