Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1070
target gene predictions
834
candidate regulatory elements
521
accessible chromatin
497
gene expression
167
differential activity
139
variant allelic effects
92
binding sites
75
chromatin state
39
eQTL
32
histone modifications
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
Date released
February, 2021
1672
September, 2022
292
May, 2021
289
June, 2020
286
September, 2023
162
February, 2024
144
May, 2020
99
October, 2022
91
August, 2021
70
March, 2023
56
January, 2021
56
March, 2020
44
November, 2022
43
May, 2022
39
February, 2020
35
August, 2017
30
March, 2024
26
February, 2023
21
January, 2020
19
April, 2020
9
August, 2018
2
January, 2018
2
May, 2024
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
July, 2020
1
June, 2021
1
November, 2019
1
November, 2020
1
October, 2019
Available data
2724
bed bed3+
616
tsv
161
bigWig
34
bed bed9+
25
txt
24
csv
13
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
3450
Homo sapiens
Biosample type
1309
primary cell
1282
tissue
684
cell line
216
in vitro differentiated cells
4
stem cell
Organ
519
epithelium
359
kidney
228
connective tissue
204
brain
187
musculature of body
185
pancreas
161
lung
139
intestine
131
vasculature
115
heart
114
limb
95
blood vessel
91
bodily fluid
89
skin of body
86
blood
85
large intestine
82
embryo
76
extraembryonic component
76
eye
69
liver
57
stomach
42
small intestine
41
adipose tissue
39
mammary gland
38
bone element
36
placenta
35
prostate gland
34
adrenal gland
33
artery
30
ureter
27
lymph node
26
penis
26
thymus
25
gonad
21
esophagus
21
spinal cord
16
spleen
15
uterus
13
lymphoid tissue
12
ovary
12
testis
12
thyroid gland
11
lymphatic vessel
11
nerve
11
pituitary gland
11
vein
10
mouth
7
breast
7
bronchus
7
urinary bladder
6
bone marrow
6
skeleton
6
tongue
5
vagina
3
nose
1
pericardium
1
trachea
Project
3124
AMP
281
KPMP
57
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4591
hg19
GRCh38
hg18
assembly!
GRCh38
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
3497 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
gene expression
differential activity
variant allelic effects
binding sites
chromatin state
eQTL
histone modifications
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
Fine-mapped variants
primary cell
CD8-positive, alpha-beta T cell
4
3
3
1
30
common myeloid progenitor, CD34-positive
14
13
monocyte
2
5
15
1
2
1
1
B cell
10
9
3
2
CD14-positive monocyte
19
4
+ See 314 more…
tissue
heart
20
19
2
2
2
stomach
21
19
3
1
brain
16
16
1
1
1
lung
17
16
1
adrenal gland
17
14
1
1
+ See 170 more…
cell line
A549
19
18
1
1
EndoC_BH1
1
7
8
3
1
K562
7
6
1
1
1
H1-hESC
2
1
1
8
1
MCF-7
6
5
1
1
+ See 258 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
10
1
1
neural progenitor cell
5
4
7
1
adipocyte
6
2
4
4
embryonic stem cell
1
6
5
extended pluripotent stem (EPS) cells
9
+ See 66 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download