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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
2
pCHi-C
1
WGBS
Assay category
23
DNA binding
9
Transcription
1
DNA methylation
Target of assay
20
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
11
May, 2019
10
October, 2019
6
August, 2021
3
February, 2020
2
February, 2021
2
March, 2020
1
July, 2019
Available data
24
bam
11
tsv
2
tagAlign
Organism
35
Homo sapiens
Biosample type
28
tissue
5
primary cell
2
cell line
Organ
272
pancreas
197
epithelium
161
liver
121
heart
92
connective tissue
89
bone element
77
kidney
63
adipose tissue
58
brain
34
blood vessel
34
vasculature
27
eye
25
limb
22
musculature of body
20
lung
14
blood
14
bodily fluid
13
artery
12
nerve
9
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
GRCh38
hg19
Lab
35
AMP-T2D consortium
assembly!
GRCh38
hg19
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
WGBS
tissue
aorta
2
4
1
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
+ See 2 more…
primary cell
endothelial cell of umbilical vein
5
cell line
smooth muscle cell of the coronary artery
2
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