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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
6
total RNA-seq
4
WGBS
2
pCHi-C
1
RNA microarray
Assay category
43
DNA binding
6
Transcription
4
DNA methylation
Target of assay
43
histone
43
histone modification
control
28
broad histone mark
15
narrow histone mark
Date released
46
August, 2017
4
February, 2023
2
February, 2020
March, 2020
1
August, 2018
1
August, 2021
1
May, 2021
1
October, 2019
Available data
18
tagAlign
2
fastq
2
tsv
1
bedpe bed3+
Organism
55
Homo sapiens
Biosample type
38
tissue
17
in vitro differentiated cells
1
primary cell
Organ
218
pancreas
169
epithelium
129
kidney
98
heart
89
bone element
66
liver
56
connective tissue
38
adipose tissue
31
brain
26
eye
19
lung
15
musculature of body
13
blood vessel
13
vasculature
8
blood
8
bodily fluid
8
limb
4
artery
4
gonad
4
ovary
4
skeleton
3
vein
2
embryo
1
bone marrow
1
lymph node
1
nerve
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
55
AMP
1
T1D
Genome assembly (visualization)
hg19
GRCh38
Lab
55
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assembly!
GRCh38
hg19
month_released!
March, 2020
target.investigated_as!
control
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue
30
3
subcutaneous adipose tissue
1
1
adipose tissue
1
islet of Langerhans
1
omental fat pad
1
in vitro differentiated cells
adipocyte
12
1
immature adipocyte
2
preadipocyte
1
white fat cell
1
primary cell
adult endothelial progenitor cell
1
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