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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
41
WGBS
34
single cell RNA-seq
26
total RNA-seq
21
snATAC-seq
Assay category
98
DNA accessibility
60
Transcription
41
DNA methylation
Date released
214
August, 2021
199
May, 2022
170
February, 2023
158
August, 2017
134
May, 2020
126
November, 2017
123
May, 2021
115
February, 2021
106
October, 2019
56
September, 2020
48
March, 2020
47
September, 2023
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
14
July, 2019
10
November, 2020
9
November, 2018
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
December, 2019
1
October, 2022
1
September, 2018
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
6
txt
Organism
199
Homo sapiens
Biosample type
134
primary cell
65
tissue
Organ
104
pancreas
80
epithelium
40
liver
1
musculature of body
Project
134
HPAP
65
AMP
Genome assembly (visualization)
38
hg19
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Audit category:
audit script error
assembly!
GRCh38
audit.ERROR.category!
audit script error
files.file_type!
bed bedMethyl
month_released!
October, 2017
BIOSAMPLE
ASSAY
199 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
skeletal muscle tissue
1
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