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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
25
ChIP-seq
2
Hi-C
2
total RNA-seq
1
pCHi-C
Assay category
100
DNA accessibility
25
DNA binding
2
3D chromatin structure
2
Transcription
Target of assay
25
control
histone
8
histone modification
8
narrow histone mark
Date released
210
August, 2021
199
May, 2022
170
February, 2023
126
May, 2020
115
February, 2021
111
November, 2017
79
October, 2019
69
May, 2021
66
August, 2017
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
16
December, 2017
16
January, 2021
15
April, 2019
10
November, 2020
9
November, 2018
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2017
1
August, 2018
1
December, 2019
1
October, 2022
1
September, 2018
Available data
70
bam
45
bigWig
23
tagAlign
2
bedpe bed3+
2
hic
1
tsv
Organism
130
Homo sapiens
Biosample type
102
primary cell
24
tissue
4
cell line
Organ
24
liver
4
pancreas
3
epithelium
Project
130
AMP
Genome assembly (visualization)
282
hg19
GRCh38
Lab
130
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assembly!
GRCh38
audit.ERROR.category!
audit script error
target.investigated_as!
histone
BIOSAMPLE
ASSAY
130 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
23
islet of Langerhans
1
cell line
EndoC_BH1
2
1
HepG2
1
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