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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
single cell RNA-seq
21
snATAC-seq
20
ATAC-seq
20
total RNA-seq
Assay category
54
Transcription
41
DNA accessibility
Date released
204
August, 2021
134
May, 2020
126
August, 2017
124
November, 2017
114
February, 2023
107
February, 2021
105
May, 2021
95
May, 2022
83
October, 2019
47
September, 2023
40
September, 2020
37
March, 2020
23
July, 2019
21
February, 2020
19
April, 2020
18
October, 2018
17
December, 2017
16
April, 2019
12
May, 2019
9
October, 2017
8
February, 2018
8
January, 2018
8
January, 2021
8
June, 2019
8
November, 2018
5
December, 2018
4
January, 2019
4
March, 2023
3
May, 2023
1
August, 2018
1
December, 2019
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
20
bed narrowPeak
20
bigWig
Organism
95
Homo sapiens
Biosample type
54
primary cell
41
tissue
Organ
pancreas
80
epithelium
40
liver
1
musculature of body
Project
54
HPAP
41
AMP
Genome assembly (visualization)
20
hg19
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
1
AMP-T2D consortium
Audit category:
audit script error
assembly!
GRCh38
audit.ERROR.category!
audit script error
organ_slims!
pancreas
vasculature
BIOSAMPLE
ASSAY
95 results
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single cell RNA-seq
snATAC-seq
ATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
tissue
liver
20
20
skeletal muscle tissue
1
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