Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
4
WGBS
3
ATAC-seq
2
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
55
DNA binding
4
DNA methylation
3
DNA accessibility
2
Transcription
Target of assay
31
histone
31
histone modification
24
control
20
broad histone mark
11
narrow histone mark
Date released
41
August, 2017
18
October, 2018
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
October, 2019
Available data
21
fastq
19
bam
8
tagAlign
3
bigWig
3
tsv
2
bed narrowPeak
1
bed broadPeak
1
bedpe bed3+
1
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
66
tissue
1
in vitro differentiated cells
Organ
282
pancreas
260
liver
196
epithelium
141
kidney
125
heart
110
connective tissue
68
brain
67
adipose tissue
55
eye
45
vasculature
43
blood vessel
42
musculature of body
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
9
bone element
9
spleen
8
skeleton
6
embryo
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
67
AMP
Genome assembly (visualization)
425
hg19
GRCh38
Lab
67
AMP-T2D consortium
assembly!
GRCh38
audit.ERROR.category!
inconsistent ontology term
audit.WARNING.category!
inconsistent assembly
organ_slims!
limb
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
36
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
1
3
1
in vitro differentiated cells
white fat cell
1
Download