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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
ChIP-seq
1
Hi-C
Assay category
1
3D chromatin structure
1
DNA binding
Target of assay
1
control
Date released
1
February, 2021
1
July, 2019
1
June, 2019
1
May, 2021
Available data
2
bam
2
bed bed3+
1
bigWig
1
hdf5
Organism
4
Homo sapiens
Biosample type
67
tissue
39
in vitro differentiated cells
4
primary cell
Organ
178
epithelium
154
pancreas
15
vasculature
13
blood vessel
10
vein
8
blood
8
bodily fluid
7
brain
5
kidney
4
connective tissue
3
liver
2
eye
2
musculature of body
1
bone element
1
bone marrow
1
heart
Project
3
AMP
1
T1D
Genome assembly (visualization)
23
hg19
GRCh38
Lab
3
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assembly!
GRCh38
audit.ERROR.category!
inconsistent ontology term
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
4 results
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pCHi-C
ChIP-seq
Hi-C
primary cell
adult endothelial progenitor cell
1
brain pericyte
1
cardiac fibroblast
1
osteoblast
1
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