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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
35
ChIP-seq
2
total RNA-seq
1
Hi-C
1
pCHi-C
Assay category
100
DNA accessibility
35
DNA binding
2
Transcription
1
3D chromatin structure
Target of assay
27
control
8
histone
8
histone modification
8
narrow histone mark
Date released
213
August, 2021
200
May, 2022
169
February, 2023
147
February, 2021
134
May, 2020
126
November, 2017
123
May, 2021
121
August, 2017
106
October, 2019
56
September, 2020
47
March, 2020
47
September, 2023
29
July, 2019
24
May, 2019
23
February, 2020
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
11
October, 2018
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
June, 2019
7
January, 2018
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2022
1
September, 2018
Available data
80
bam
53
bigWig
31
tagAlign
8
bed narrowPeak
5
fastq
1
tsv
Organism
139
Homo sapiens
Biosample type
102
primary cell
35
tissue
2
cell line
Organ
33
liver
4
spleen
Project
139
AMP
Genome assembly (visualization)
290
hg19
GRCh38
Lab
139
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assembly!
GRCh38
audit.ERROR.category!
inconsistent replicate
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
139 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
31
spleen
4
cell line
HepG2
1
1
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