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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
1
FAIRE-seq
Assay category
13
DNA binding
1
DNA accessibility
Target of assay
12
control
1
RNA binding protein
1
transcription factor
Date released
6
October, 2019
5
April, 2019
1
July, 2019
1
June, 2019
1
May, 2019
Available data
62
txt
14
bam
12
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
hic
Organism
14
Homo sapiens
Biosample type
8
tissue
3
cell line
3
primary cell
Organ
142
liver
68
pancreas
33
epithelium
29
vasculature
28
blood vessel
28
brain
28
connective tissue
20
heart
19
adipose tissue
18
limb
14
kidney
11
nerve
9
artery
8
spleen
8
vein
6
blood
6
bodily fluid
6
embryo
4
musculature of body
1
eye
Project
14
AMP
Genome assembly (visualization)
GRCh38
124
hg19
Lab
14
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
assembly!
GRCh38
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
FAIRE-seq
tissue
kidney
7
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
epithelial cell of proximal tubule
2
kidney epithelial cell
1
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