Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
ATAC-seq
Assay category
4
3D chromatin structure
2
DNA accessibility
Date released
4
October, 2019
2
March, 2020
Available data
26
bam
23
fastq
22
tagAlign
16
bigWig
7
bed bedgraph
7
bedpe bed3+
6
bed bed3+
5
bed bed3
4
bed narrowPeak
4
hic
4
tsv
3
txt
2
bigBed narrowPeak
2
ibed
Organism
6
Homo sapiens
Biosample type
32
cell line
17
tissue
9
primary cell
6
in vitro differentiated cells
Organ
2
connective tissue
Project
6
AMP
Genome assembly (visualization)
21
hg19
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assembly!
GRCh38
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
6 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ATAC-seq
in vitro differentiated cells
adipocyte
2
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
Download