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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
38
ChIP-seq
2
total RNA-seq
1
FAIRE-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
101
DNA accessibility
38
DNA binding
3
Transcription
Target of assay
29
control
8
histone
8
histone modification
8
narrow histone mark
1
recombinant protein
1
transcription factor
Date released
214
August, 2021
200
May, 2022
162
August, 2017
147
February, 2021
147
February, 2023
134
May, 2020
126
November, 2017
107
October, 2019
106
May, 2021
56
September, 2020
47
September, 2023
46
March, 2020
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
84
bam
54
bigWig
31
tagAlign
9
bed narrowPeak
9
fastq
1
bigBed narrowPeak
1
csv
1
tsv
Organism
143
Homo sapiens
Biosample type
103
primary cell
35
tissue
5
cell line
Organ
33
liver
3
blood
3
bodily fluid
3
spleen
1
pancreas
Project
143
AMP
Genome assembly (visualization)
286
hg19
GRCh38
Lab
143
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
GRCh38
award.project!
T1D
month_released!
December, 2019
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
FAIRE-seq
pCHi-C
single cell RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 25 more…
tissue
liver
31
spleen
3
pancreas
1
cell line
GM12878
3
HepG2
1
1
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